›› 2010, Vol. 28 ›› Issue (6): 17-473-475.

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Bioinformatics Analysis of COⅠ Gene of Simulium quinquestriatum

LUO Hong-Bin1,YANG Ming2 *,CHEN Han-Bin2   

  1. 1 Department of Biochemistry,Medical School,Hubei University for Nationalities,Enshi 445000,China;
    2 Department of Biology,Guiyang Medical College,Guiyang 550004,China
  • Online:2010-12-31 Published:2011-03-07

Abstract: 【Abstract】  The genomic DNA was extracted from Simulium quinquestriatum (Sq) and its COⅠ gene was amplified by PCR. The PCR product was purified and cloned into plasmid pMD18-T vector. The recombinant plasmid was transformed into Escherichia coli DH5α and then identified by digestion with restriction enzyme and PCR amplification. The amplified frac-tions (1 621 bp) included complete COⅠ gene (1 542 bp, GenBank accession number: DQ534949), 5′ tRNA-Tyr and 3′ tRNA-Leu partial fraction. The COⅠ gene sequence had a high identity (99%) with that of S. quinquestriatum (GenBank accession number: AY251520). Bioinformatics analysis showed that the Sq-COⅠopen reading frame encoded a 513-amino acid protein with Mr 5 565, pI 5.84. Structural prediction showed this protein possessed a conservative domain of COⅠ gene.

Key words: Simulium quinquestriatum, COⅠ, Clone, Bioinformatics