Objective To analyzed the genetic diversity, genetic differences between populations and differentiation time of Echinococcus granulosus and E. multilocularis of Qinghai isolates, in order to provide scientific basis for species tracing and prevention and control of Echinococcus in Qinghai Province, China. Methods For genetic analysis, 50 liver lesion samples were collected from hospitalized echinococcosis patients in the Affiliated Hospital of Qinghai University to extract genomic DNA and amplify mitochondrial dehydrogenase 1 gene (nad1). Sequence multiple alignment was performed using Clustal X v2.0 software. Geographic informatics mapping of patients’ residence was constructed using ArcGIS software. Sequence haplotype analysis was made with DnaSP v6 software. Modeltest 3.7 software and PAUP*4.0B10 software were used to calculate the minimum optimal nucleic acid evolution model. The Bayesian’s phylogenetic evolution tree was constructed with MrBayes-3.2.7 software. The differentiation time of each node in the phylogenetic tree was estimated with the Bayesian method using BEAST v2.6.3 software. Results We successfully identified 48 Echinococcus lesion samples specimen and obtained the full length of complete nad1 gene of 894 bp. Among them, 13 samples were identified as the G1 genotype of E. granulosus, and 35 samples as E. multilocularis. All the sequences showed > 99% similarity to those in GenBank. Four haplotypes were identified as H1-H4 in the two species respectively; H3 was the dominant haplotype in E. granulosus samples(10/13), which is present in Xining, Guoluo, Yushu, Haidong, Haibei and Huangnan. H2 haplotype was found dominant in E. multilocular samples (51.4%,18/35), which is present in Xining, Guoluo, Yushu, and Haidong. The phylogenetic tree showed that E. granulosus and G1 genotype clustered into one branch, and E. multilocularis and Asian strain clustered into one branch. The results of differentiation time showed that the nearest common ancestor of E. granulosus, E. multilocularis, E. vogeli and E. oligarthrus was about 5.5 Mya (95% confidence interval 4.5-6.5 Mya), and the differentiation time of E. granulosus and E. multilocularis was about 2.5 Mya (95% confidence interval 2.3-4.1 Mya). Conclusion Both human E. granulosus and E. multilocularis in Qinghai Province show high genetic diversity. E. granulosus was found of G1 genotype, with H3 as the dominant haplotype, while in E. multilocularis samles H2 is the dominant. The two speies are widely distributed throughout Qinghai Province. The two species of Echinococcus exhit closer genetic relationship and differentiation timing.
To understand the Anisakis larvae infection status in marine fishes sold in Shanghai, the fresh marine fishes caught in the East China Sea area were collected from Farmers’ markets, supermarkets and seafood markets in Shanghai in 2022. The suspected Anisakis larvae were searched in the offal and muscles after dissection and observed under optical microscope and scanning electron microscope, respectively. A total of 338 marine fish of 16 species were collected, and 1 065 Anisakis larvae were found from 116 fish of 6 species, with a total infection rate of 34.3% (116/338) and average infection intensity of 9.2 larvae/fish. The highest infection rate was 11/12 in Lophiiformes, and the highest average infection intensity was 13.0 larvae/fish in Larimichthys polyactis. The Anisakis larvae infection rates increased gradually from spring to winter. The infection rate and average infection intensity in winter were 51.1% (46/90) and 12.3 larvae/fish, respectively, which were the highest seasons of the year. The predominant sites of Anisakis larvae parasitise in marine fishes were the intestines and abdominal cavity, with infection rates of 54.6% (582/1 065) and 40.7% (433/1 065), respectively. The result showed that Anisakis larvae infections were present in marine fish sold in Shanghai and the infection rates of commonly consumed marine fishes such as Lophiiformes and L. polyactis were high.